How to install coot on ubuntu
- How to install coot on ubuntu movie#
- How to install coot on ubuntu 64 Bit#
- How to install coot on ubuntu 32 bit#
CALL FOR BEAM TIME PROPOSALS: The Protein Crystall.21-23 May workshop on Integrated Software for Inte.Job opportunity: Postdoctoral researcher.CALL FOR PROPOSALS FOR ESRF BEAM TIME WITH ONLINE.Last call: CCP4 summer school at APS, in USA.Announcement: EMBO Global Exchange Lecture Course.British Biophysical Society Meeting in Durham July.unusual bond lengths in PRODRG cif file.unusual bond lengths in PRODRG cif file (Grade Web.Announcement of a working group for PDBx/mmCIF for.contaminant when overexpressing a GST tagged protein.
How to install coot on ubuntu movie#
using pymol for making movie of change in protein.Final Reminder: BCA/CCP4 Summer School 2012.Summary Re: anyone scrapping an Raxis-IV?.CSX2012 Spectroscopy & X-ray Workshop, 4.-6.Announcement: EMBO Practical Course in protein exp.residuewise rmsd for multiple chain superposition.REMINDER *CALL FOR PROPOSALS FOR ESRF BEAM TIME WI.
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Differentiate salt and protein crystals.Trying to cut the resolution of the datasets.GST-fusion protein production in insect cells.FFT map coefficients only for certain chains.Best method for weighted averaging of Friedel pairs?.Evidence for hydrogen bonds between adjacent residues.postdoctoral position at Sanford-Burnham, San Dieg.Despite the fact that the relevant machine has 48 GB of RAM and 80 GB of swap.
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I had to do a LOT of recompiling programs in order to create maps or MTZ files bigger than 2 GB, and I also still have certain programs "running out of virtual memory" at 4GB as well.
![how to install coot on ubuntu how to install coot on ubuntu](https://i.stack.imgur.com/eXxbA.png)
I have also been unimpressed with the supposed "memory access" advantages of 64 bit.
How to install coot on ubuntu 32 bit#
On the whole, however, I have not seen any significant performance advantage of 64 over 32 bit running crystallography programs side-by-side on equivalent hardware. Still don't know why that is (I'm not all that familiar with Ubuntu, and don't want to be), but I imagine one could call that a "performance hit". This wasted almost an entire week of my life! I tried downgrading the operating system to 32-bit, but that reduced the number of "CPUs" available in the system from 24 to 8. I myself recently had the misfortune of trying to get a java program relying on the (apparently 32-bit only) "JMF" package to run on 64-bit linux.
How to install coot on ubuntu 64 Bit#
We have all running (CCP4, Coot, iMosflm, XDS, phenix, best, etc, etc) running in 64 bit and intent to move all user computers to uniform 64 bit environment on the next shutdown as it is more difficult to support both 32 and 64 bit enviroment. On the topic of 64 bit vs 32 which to choose?įunny enough I can't get iMosflm running reliably on 32 bit CentOS 5 or CentOS 6 and I can on 64 bits versions. This was done on particular machines configuration and would not generalize to all programs and situations. I did not try to run the 32bit XDS on the 64 bit OS. This off course was done using 32bit compiled XDS vs 64 bit compiled XDS. At the time I thought that somehow the temporary files that XDS was creating on the 32bit OS were better handled in memory instead. Interestingly, using same OSs writing locally the performance boost was not noticeable. I did quite a bit of performance comparison with XDS between two centOS 5 (64 vs 32) and did notice performance boost when writing results to a remote NFS directory.